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encyclopedia of Rare Disease Annotation for Precision Medicine



   aarskog syndrome
  

Disease ID 1017
Disease aarskog syndrome
Definition
Aarskog syndromeis an extremely rare genetic disorder marked by stunted growth that may not become obvious until the child is about three years of age, broad facial abnormalities, musculoskeletal and genital anomalies, and mild intellectual disability. - NORD
Reference: NORD
Synonym
aarskog disease
aarskog syndrome (disorder)
aarskog syndrome [dup] (disorder)
aarskog syndrome, x-linked
aarskog's syndrome
aarskog-scott syndrome
aarskogs syndrome
aas
facio-digito-genital dysplasia
faciodigitogenital syndrome
faciogenital dysplasia
fgdy
greig syndrome
greigs syndrome
scott aarskog syndrome
Orphanet
OMIM
DOID
UMLS
C0175701
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:1)
C0026848  |  myopathy  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:2)
2737  |  GLI3  |  UNIPROT
2245  |  FGD1  |  CLINVAR;CTD_human;GHR;ORPHANET;UNIPROT
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:1)
2245  |  FGD1  |  CIPHER;CTD_human
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:23)
212  |  ALAS2  |  2.217  |  DISEASES
257  |  ALX3  |  1.996  |  DISEASES
8945  |  BTRC  |  3.016  |  DISEASES
2017  |  CTTN  |  2.823  |  DISEASES
23191  |  CYFIP1  |  2.679  |  DISEASES
54954  |  FAM120C  |  4.041  |  DISEASES
2200  |  FBN1  |  1.295  |  DISEASES
2245  |  FGD1  |  8.139  |  DISEASES
89846  |  FGD3  |  6.029  |  DISEASES
121512  |  FGD4  |  4.062  |  DISEASES
55785  |  FGD6  |  4.144  |  DISEASES
3725  |  JUN  |  2.003  |  DISEASES
5599  |  MAPK8  |  1.478  |  DISEASES
5601  |  MAPK9  |  1.362  |  DISEASES
4168  |  MCF2  |  5.068  |  DISEASES
91624  |  NEXN  |  2.777  |  DISEASES
9124  |  PDLIM1  |  1.929  |  DISEASES
23133  |  PHF8  |  2.94  |  DISEASES
5742  |  PTGS1  |  1.235  |  DISEASES
391  |  RHOG  |  2.739  |  DISEASES
6714  |  SRC  |  1.961  |  DISEASES
79805  |  VASH2  |  3.274  |  DISEASES
7409  |  VAV1  |  2.769  |  DISEASES
Locus(Waiting for update.)
Disease ID 1017
Disease aarskog syndrome
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:2)
HP:0003198  |  Myopathic changes  |  1
HP:0100754  |  Mania  |  1
Disease ID 1017
Disease aarskog syndrome
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:15)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs137853264NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54465522CT
rs137853265158099972245FGD1umls:C0175701BeFreeAttention-deficit/hyperactivity disorder (ADHD) and variable clinical expression of Aarskog-Scott syndrome due to a novel FGD1 gene mutation (R408Q).0.4873289312005FGD1X54467901CT
rs137853265NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54467901CT
rs137853266NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54467796CA
rs137853267NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54465797TC
rs28935497NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54456233CT
rs28935497109305712245FGD1umls:C0175701UNIPROTA mutation in the pleckstrin homology (PH) domain of the FGD1 gene in an Italian family with faciogenital dysplasia (Aarskog-Scott syndrome).0.4873289312000FGD1X54456233CT
rs387906718NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54455497GA
rs398124155NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54467837AC
rs398124156NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54465725GA
rs398124160NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54495258GA
rs398124161NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54449694-AA
rs398124162NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54449671-G
rs756586058NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54470714-G
rs794727099NA2245FGD1umls:C0175701CLINVARNA0.487328931NAFGD1X54450303TC
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1017
Disease aarskog syndrome
Case(Waiting for update.)